LOCUS AF374726 9273 bp DNA linear PRI 01-JUN-2001 DEFINITION Homo sapiens coagulation factor II receptor-like 2 (F2RL2) gene, complete cds. ACCESSION AF374726 VERSION AF374726.2 GI:14278710 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 9273) AUTHORS Rieder,M.J., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (28-APR-2001) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA REFERENCE 2 (bases 1 to 9273) AUTHORS Rieder,M.J., Carrington,D.P., Chung,M.-W., Lee,K.L., Poel,C.L., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (01-JUN-2001) Molecular Biotechnology, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA REMARK Sequence update by submitter COMMENT On Jun 1, 2001 this sequence version replaced gi:13991934. To cite this work please use: SeattleSNPs. NHLBI Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.mbt.washington.edu). FEATURES Location/Qualifiers source 1..9273 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" repeat_region 120..221 /rpt_family="L1MB3" /rpt_type=dispersed variation 419 /frequency="0.29" /replace="G" variation 483 /frequency="0.02" /replace="T" variation 506 /frequency="0.32" /replace="G" variation 507 /frequency="0.25" /replace="C" variation 512 /frequency="0.24" /replace="A" variation 535 /frequency="0.24" /replace="T" variation 937 /frequency="0.02" /replace="C" gene 969..7322 /gene="F2RL2" mRNA join(969..1176,5701..7322) /gene="F2RL2" /product="coagulation factor II receptor-like 2" variation 1007 /gene="F2RL2" /frequency="0.02" /replace="G" CDS join(1113..1176,5701..6761) /gene="F2RL2" /note="thrombin receptor-like 2" /codon_start=1 /product="coagulation factor II receptor-like 2" /protein_id="AAK51564.1" /db_xref="GI:13991935" /translation="MKALIFAAAGLLLLLPTFCQSGMENDTNNLAKPTLPIKTFRGAP PNSFEEFPFSALEGWTGATITVKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYL LVFVVGVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWV FGEVLCRATTVIFYGNMYCSILLLACISINRYLAIVHPFTYRGLPKHTYALVTCGLVW ATVFLYMLPFFILKQEYYLVQPDITTCHDVHNTCESSSPFQLYYFISLAFFGFLIPFV LIIYCYAAIIRTLNAYDHRWLWYVKASLLILVIFTICFAPSNIILIIHHANYYYNNTD GLYFIYLIALCLGSLNSCLDPFLYFLMSKTRNHSTAYLTK" variation 1156 /gene="F2RL2" /frequency="0.01" /replace="C" variation 1430 /gene="F2RL2" /frequency="0.06" /replace="G" variation 2055 /gene="F2RL2" /frequency="0.03" /replace="T" variation 2120 /gene="F2RL2" /frequency="0.01" /replace="T" variation 2136 /gene="F2RL2" /frequency="0.01" /replace="G" variation 2168 /gene="F2RL2" /frequency="0.02" /replace="T" variation 2174 /gene="F2RL2" /frequency="0.01" /replace="-" repeat_region 2250..2441 /rpt_family="MER107" /rpt_type=dispersed variation 2448 /gene="F2RL2" /frequency="0.16" /replace="T" variation 2535 /gene="F2RL2" /frequency="0.38" /replace="T" variation 2800 /gene="F2RL2" /frequency="0.04" /replace="A" variation 2866 /gene="F2RL2" /frequency="0.35" /replace="T" variation 3116 /gene="F2RL2" /frequency="0.03" /replace="A" variation 3135 /gene="F2RL2" /frequency="0.02" /replace="A" variation 3281 /gene="F2RL2" /frequency="0.04" /replace="A" variation 3386 /gene="F2RL2" /frequency="0.02" /replace="A" repeat_region 3543..4180 /rpt_family="L2" /rpt_type=dispersed variation 3553 /gene="F2RL2" /frequency="0.02" /replace="T" variation 3565 /gene="F2RL2" /frequency="0.08" /replace="T" variation 3610 /gene="F2RL2" /frequency="0.01" /replace="-" variation 3694 /gene="F2RL2" /frequency="0.07" /replace="C" variation 3734 /gene="F2RL2" /frequency="0.32" /replace="T" variation 3850 /gene="F2RL2" /frequency="0.02" /replace="A" variation 3976 /gene="F2RL2" /frequency="0.60" /replace="-" repeat_region 4181..4526 /rpt_family="MLT1D" /rpt_type=dispersed variation 4223..4226 /gene="F2RL2" /frequency="0.02" /replace="-" variation 4264 /gene="F2RL2" /frequency="0.32" /replace="C" variation 4305 /gene="F2RL2" /frequency="0.35" /replace="G" variation 4464 /gene="F2RL2" /frequency="0.01" /replace="G" repeat_region 4527..4827 /rpt_family="AluY" /rpt_type=dispersed variation 4556 /gene="F2RL2" /frequency="0.03" /replace="A" variation 4580 /gene="F2RL2" /frequency="0.05" /replace="A" variation 4627 /gene="F2RL2" /frequency="0.30" /replace="C" variation 4635 /gene="F2RL2" /frequency="0.06" /replace="C" variation 4747 /gene="F2RL2" /frequency="0.01" /replace="C" variation 4778 /gene="F2RL2" /frequency="0.05" /replace="A" repeat_region 4828..4948 /rpt_family="MLT1D" /rpt_type=dispersed repeat_region 4949..5071 /rpt_family="L2" /rpt_type=dispersed variation 4949 /gene="F2RL2" /frequency="0.01" /replace="G" variation 5091 /gene="F2RL2" /frequency="0.02" /replace="T" variation 5126 /gene="F2RL2" /frequency="0.05" /replace="A" variation 5312 /gene="F2RL2" /frequency="0.36" /replace="T" variation 5416 /gene="F2RL2" /frequency="0.07" /replace="C" variation 5439 /gene="F2RL2" /frequency="0.06" /replace="A" variation 6165 /gene="F2RL2" /frequency="0.01" /replace="G" variation 6384 /gene="F2RL2" /frequency="0.05" /replace="G" variation 6767 /gene="F2RL2" /frequency="0.01" /replace="C" variation 6802 /gene="F2RL2" /frequency="0.01" /replace="T" variation 6863 /gene="F2RL2" /frequency="0.43" /replace="G" variation 6867 /gene="F2RL2" /frequency="0.01" /replace="C" variation 6896 /gene="F2RL2" /frequency="0.03" /replace="C" repeat_region 6903..7174 /rpt_family="AluSx" /rpt_type=dispersed variation 7176 /gene="F2RL2" /frequency="0.04" /replace="C" variation 7228 /gene="F2RL2" /frequency="0.01" /replace="C" variation 7325 /frequency="0.39" /replace="C" repeat_region 7469..7774 /rpt_family="AluJo" /rpt_type=dispersed variation 7638 /frequency="0.01" /replace="G" variation 7728 /frequency="0.01" /replace="T" variation 7767 /frequency="0.38" /replace="C" variation 7792 /frequency="0.02" /replace="G" variation 8181 /frequency="0.39" /replace="G" variation 8398 /frequency="0.01" /replace="A" variation 8437 /frequency="0.01" /replace="-" variation 8453 /frequency="0.36" /replace="A" variation 8571..8600 /frequency="0.24" /replace="-" variation 8704 /frequency="0.33" /replace="G" variation 8769 /frequency="0.34" /replace="G" variation 9117..9118 /frequency="0.02" /replace="-" variation 9139 /frequency="0.02" /replace="A" ORIGIN 1 gggatggtca ggcttcaagt ttaagtttta ttaactacag aaaaatgtgt tataatgcat 61 ttttttactg tatattaagt catactctac agaatataac aattcataaa agcttatatg 121 ttgtacaaca atgtgaatgt atttaacatt actgaactgt acacttaata ctggttaaga 181 tagtaaattt tatgttacgt atattttacc actattaaaa atatcttatt gtagacttat 241 tcaccaacac tcatggaata aagggagtcc tcattttcat gatgtgctat gattttagtt 301 taactgaaca gcgttgtttg ggaggttcct ccagttatct gaccctaagg gttattgaat 361 ggctcaaaac acatcaagat aaggcaaaaa aaaaaaaaaa aaaaaagcct gaacaaacac 421 catcctcacc cggcgaagaa aaaccaccac cactcaaaag ccaggttctg gccaggcact 481 gacgacaaac tgaaatcaat attacattga tggaaaattt tcaaagtgat tcaccgctca 541 atttgaattt cttaaaagtt tgttttccat gattaattta taattatgta aagtgtttaa 601 ggattaagat ttgaaatagc tgggaagata aaggaaagga taatttatta agtagaaatt 661 acactctgga actgcatttt taaaacggat aagaaatgaa atgtgggaca gattcaaaac 721 ttactgctgt tcaacatctg tttttggctt agttctgtaa aggcctgtgt aatttctgcc 781 attctttaaa agcaaatcta ctaggggaga attacagcac ctattcagaa tagattgttg 841 ggggtgggta agagttaaat gcctttctcc agggataacg taacacgttc agaggcttgg 901 cctgagtcat gcttactgaa gcatcgagtg gattacatcc tttccctgcg gaggaccagg 961 gcaagtttcc tgcctgcacg gcacaggaga gcaaacttct acagacagac caaggcttcc 1021 atttgctgct gacacatgga actgaggtga aattgtgctc catgatttta cagatttcat 1081 aacgtttaag agacgggact caggtcatca aaatgaaagc cctcatcttt gcagctgctg 1141 gcctcctgct tctgttgccc actttttgtc agagtggtaa gcaattttct cagggggtag 1201 gatggggatg tgggtttctg ttacaaatta agagtcaact gaacctaggt ttctttgcat 1261 ctcacacaaa ctgtaaaccc caaaggcagt ttgatcttta ttattaaaag gtagaatcat 1321 ggaaatgaac atctatagtt cattcactct attcaaacct ggtcatagac taagtgttcc 1381 ctcctgatgt ttaaaaatgt gtggcatatt caagatttta gatgtctaca attaagtcag 1441 ggagcaattt tgaaagtcgt ttttgtgttt gtaagaattt ctcttctggt taagcaaaga 1501 tggcactttt tctagggatt aaaatatata tcctgtgttt aaacctcttg gtgagacata 1561 aatgggagaa acaagaatac tgccagaaag agaaagtcat ctgctttcaa tagctggcaa 1621 tgctaataag tcagtatttc cgaaatgaat gacctttttt gactttaagt ggggagttct 1681 ccctaccctc atatatgatt ttttaatttt aaaaataagg tctcccaaat actattattc 1741 aactttgaat gtactttcca ctttacccat cacaatgtta gcctgaaacc tcctgctttt 1801 tccaaaaata acaaatttgg gataggtctg tacctgttac tctttgttag gtcacacact 1861 ccagtcaaca ttgttaggag tgggagaggc aaagactgga catagcaagg gaaacaaaaa 1921 cagaaatcaa tgctttctaa aggaacattg cttaaattca catttggaat ccctgagcgg 1981 ttgcagagag ctctaagaga atctgtggtg attagcagta agcacatgtg ggatttatga 2041 atataataag tgcacgctct ttctgggagt agatgggcca atatgttgag aagcagaatt 2101 gcaaaagaag caaggttttc gggggtggtt ccttcaagac gctaataggg tttgatggag 2161 gtgaaaacgg gggcctctga aggaaacaaa gaggcagtga atttgctttc ttccatgggg 2221 tgggggagaa atgtgaagga agaatgaagc aagcttgtcc aacctgcctt atttcgttgt 2281 ggttttgttt tgttttaggc ttttagcagc ctgaagccat ggtttttagt ttctgtctct 2341 agaggtaaat ggaaaagagg gatgaggaag gggctttact ggctcaacta gaaacagaaa 2401 ctatgaatcc atgactgtat tctctccctt ggacacccct gagaggccgg agttcattct 2461 ctttggatta gttcttcaag gccttttccc ggatagaaaa acatttccga aatattatgc 2521 ccaatggaag cctccataaa gaattaaaat acaataaaaa aatttaacaa tgagtacaat 2581 tcataaggaa aaccaggctc tgaggaataa aagccttatt taagtggacc cagatctggc 2641 attctcacgg aaaatggaat caaatcaact tttccacaaa acacaggcac tgtttggcat 2701 gtctggaggc atgatgtctt gctaaatccc agaaactttc tgaaaacgga caaacacttg 2761 gttttaacag ctttttaaaa tcaggctaat aacttgtacg gcatgctctt caggcaccat 2821 tctctaactt tgtgcctatc tttaaaggca cttctctttg ggtgaagtca gatgcaagaa 2881 cttttccaaa atgcaaaagt gagcagaagg gtttgtgtgt cacacaacac agcttctaag 2941 atcacctcta aatacaggca tagaagaatg ctgcctccca aatttttctt tccttttctt 3001 taatctacct tttcttaaat gatacctgat cacctccata cccctcagtt actaggacac 3061 acctcctcta ttttacaccg tgaattcagc ttgtgcaatc tcaggtttac gtggagggtt 3121 tccatttcac ccgggagcta actgctagag attaaagcag gaagagaaac tggctctgaa 3181 tgaaacatag gttactaaac actaacttca agtattcaat atggaggaat tttgaggcca 3241 tgggacaaga cataatggcg cagtactggc attttaaatc gataagaatg aggtttatat 3301 ttggcataga agtctatctt aaaggtaaca ttagaaatct gggagaatct attttctata 3361 catgtgaaag ggttacaaaa agttatataa taataaatgt tcaggtttga gctttaagat 3421 tttgtttttg aaattgcagg aattaggatt attaacatca acatgccaag taacaccaaa 3481 tattgatagc atatagttga tgtgtttcta tcttttaaag aattcatttc caacttctta 3541 ggtcctcata ccgatttcat cttccgattt ttcctccttt gtttcctctt cccttaaaat 3601 ctgtcattac ccctaaagtc cacctttgga ttctttcttc tcataactcc ccctaggcca 3661 tctcaaccac tcccattaaa ttaaacgaga gcctccatgc agactacaat aaatcatgcc 3721 tctaatttgg gctcctggaa ttttggaccc acatccagtc ttctaaccag ttgctggaca 3781 ttttacacac taatattcca ccagcaactc atcctcagtc agactaaaaa cagattgtag 3841 cttctccccg atcctgtctc cttgtctccc tccaactcag ttaatggcat cctctccctc 3901 caagtcatct agagtagaaa cctgagtcat tattgcttcc tgcctctccc tcactgcacc 3961 ccaaagccaa tcagacacca agtcccttta agccgccatc agagtctcac gtgttcgcct 4021 ctgcctttcc ataaccactg ttctagctca gtaactcact gagctatgaa tgatgacagt 4081 agcctccaaa tcaggtcccc ttgcctgtaa tttcttacct ttccaatctg ttctctacac 4141 tattacctaa gtcatcttaa aaacaagtca aaataacggc tatattcgtt tcctactgct 4201 gctatatcaa atcattacaa actgagtggc ttaaaataac agattatatt tctggagatc 4261 agaggtctta aaatcaaggc tgttggtggg gttgtgttca ttctcgaggc tctaggagag 4321 aatcggctat cttgcttttt tcagcttcta gaatctgcct gcattccttg ggttatgacc 4381 ctttcttcca tcttcaaagc cagcagcata gcatcttcaa atctctgact ttgacaaccc 4441 tcttaccttc cccttatatg gactgttatg attatatttg acccacccag gcaatccagg 4501 aaaatctcat tttaagatcc ttaactggcc gggcgcggtg gctcacgcct gtaatcccag 4561 cactttgggt ggccgaggcg ggcagatcac gaggtcagga gatcgagacc atcctggcta 4621 acatggtgaa accctgtctc tactaaaaaa atacaaaaaa ttagccaggc ctggtggcgg 4681 gcgcttgtag tcccagctac tggggaggct gaggcaggag aatggcgtga acccgggagg 4741 cggaggttgc agtgagctga gatcgtgcca ctgcactcca gcctgggcga cagagtgaga 4801 ctgtctcaaa aaaaaaaaaa aaaaaaagga agatccttaa ctaagttaga tctgcaaaat 4861 cccttttgct aggtaaagga atatacttgt aggttccagg aattagcagg tagaatcttt 4921 gcggggggct actattctgc ctaacacaat ggtcattcct ctgttcaaaa ttgtgtgtgc 4981 aatcccatca tctgtgaata gacatatgat ttcttaggac agtttagagg cccttcagga 5041 atttagctgt cacccactct ttcaatttcc tttctcagct gcactttatt cgcataagac 5101 aatgcatttt tatgcatctt ctccacgagt agcattactt acagatagaa atggatttta 5161 tttaaaactt tacaccactg acacatcaat gtacaataaa aatttgctaa atcaacttat 5221 ctggcattcc cagatcccat gatagcccac actatgcttc tgtccattca tcaccagcag 5281 aatcttactc attaaattcc atctttttag gaaccttgct agtctttgct caagttcatc 5341 ttttccttga cattttgctc aaacatctga atctattaag tattgtctga atgcctgtat 5401 agtttgtagt caacatgcct ataatgttct gatgggctgt ttttgtttct tctaatagta 5461 ttataaacac tttacataca aggactgatc atttagtttt tgtttccgca caagatagtg 5521 ttgttctggg gcatatgata tgtattaaat atatgcttgt tgactgccta atctacaata 5581 actttttaaa ataaaaatga tcttaaattc tacaatcaca gaaattattt acaaataatt 5641 aaacacactt tcttttctct tgaactatac atttatgtta atactttctt tcaattacag 5701 gcatggaaaa tgatacaaac aacttggcaa agccaacctt acccattaag acctttcgtg 5761 gagctccccc aaattctttt gaagagttcc ccttttctgc cttggaaggc tggacaggag 5821 ccacgattac tgtaaaaatt aagtgccctg aagaaagtgc ttcacatctc catgtgaaaa 5881 atgctaccat ggggtacctg accagctcct taagtactaa actgatacct gccatctacc 5941 tcctggtgtt tgtagttggt gtcccggcca atgctgtgac cctgtggatg cttttcttca 6001 ggaccagatc catctgtacc actgtattct acaccaacct ggccattgca gattttcttt 6061 tttgtgttac attgcccttt aagatagctt atcatctcaa tgggaacaac tgggtatttg 6121 gagaggtcct gtgccgggcc accacagtca tcttctatgg caacatgtac tgctccattc 6181 tgctccttgc ctgcatcagc atcaaccgct acctggccat cgtccatcct ttcacctacc 6241 ggggcctgcc caagcacacc tatgccttgg taacatgtgg actggtgtgg gcaacagttt 6301 tcttatatat gctgccattt ttcatactga agcaggaata ttatcttgtt cagccagaca 6361 tcaccacctg ccatgatgtt cacaacactt gcgagtcctc atctcccttc caactctatt 6421 acttcatctc cttggcattc tttggattct taattccatt tgtgcttatc atctactgct 6481 atgcagccat catccggaca cttaatgcat acgatcatag atggttgtgg tatgttaagg 6541 cgagtctcct catccttgtg atttttacca tttgctttgc tccaagcaat attattctta 6601 ttattcacca tgctaactac tactacaaca acactgatgg cttatatttt atatatctca 6661 tagctttgtg cctgggtagt cttaatagtt gcttagatcc attcctttat tttctcatgt 6721 caaaaaccag aaatcactcc actgcttacc ttacaaaata gtgaaatgat cttagagaac 6781 aaggacagcc atcacagaga acgtctgttt tcaagaacaa cataagcata gtgcaaggag 6841 ctccatttcc gagctcctaa gaaatatgct tcaaaggtca aacattacaa aagcattagt 6901 agtttgtttg tttgtttttg agactgagtc tcactttatc acccagactg gcgtgcagtg 6961 gcactatctt ggctcattgc aacctctgcc tcccaggtca gcctcccaag tagctgggat 7021 tacaccacca tgcccagcta ctaaaaatac ttgtattttt agtagagacg gggtttcacc 7081 atgttgacca ggctggtctt gaactcctga cctcaagtga tcttccggcc tcagcctccc 7141 aaagtgctgg attacaggcg tgagccactg agccagccag cattagtaat ttttaaaaac 7201 actttatcag tattttaaaa atgttaatgc aggagaaaag atatcacaac tctatggaaa 7261 atgacatttc catttgcctt attgctactt caagctcttt aaatcaccat cttccctatt 7321 tctgtgagtg gtattgccat ccttgacatt tgacatcatt ttttattctt tggtctcttt 7381 tgactctcat gctggtggct gcctcatcaa ctgattctat ctttgtaggg tccctcacca 7441 gggtctttta tctagtttca cctttgcctt cttttttcct ttttttaata gagacagtgt 7501 ctcgcttcgt cacctggctg aagtgcagta gcctgatcat agctcacttc agcctccaac 7561 tcctgggctc aagcaatcct gctgtctcag cctcccaagt aactaagact acaggcatgc 7621 accaccatac ccaactaatt ttatttttta ttttttgcag agatggagtc tcactgttgc 7681 ccaggctggt cttgaactcc tggtctcgag tgatcttcct atctcagcct cccaaagtgc 7741 tgggactaca ggcatgagcc actacgtcca ggccacctct accttctaac cattctctcc 7801 actgccagcc taccctccac cacttcacaa gtcctgccag attaatcttc cttagatatc 7861 agttaggata catcactaaa acatttccac taactccact gtttctataa taaatcataa 7921 atctttagcc tggcattcaa ggctaacttg ctaatcacac ttcccattaa accttgctta 7981 tgatataggc accaaccaaa cctcttgctc tgctatatct ccactctgcc tcagactgaa 8041 aagctagtcc taacgtcttt gccttaattc tgttcatttt ttcaagtcct tgaaggacca 8101 ttcttccctg attctcaggc tagaagtgtc acttttctta tctgtacttc caaagcactt 8161 tcgtatattt ttattatggc atttatatat agttcattta tatttaaatt ttaattccat 8221 gaacaatcaa gtaccaagta taatggagaa ggtgctcatc ctctgccttc cttgagcttc 8281 tgggtgatgc caggcccaag tctttgtggc acccagctcc atgctttgaa tactatgtgg 8341 ctgaatgaat ttttaaaatc tcaaagcagt taaacagcag gaaagcccat taacttcgta 8401 ctgaaaaagc aacatactgt gatgatacgg gatgacatca tttcaggttg ggcatacaaa 8461 aaagtaagga agctaaacta agactatact caccaggcca tttagaagtt ttaaataatg 8521 cctccactat tttttttctt agacatagct tttaatgggg aaatggaatt ttgttattaa 8581 tacccattat attcctgtaa gtaaatgact atttttccct taactcagtg attagacagg 8641 aaggaagaca ttagtgatta gacaggaggg aagatattag tgattagaca gcagggaaga 8701 tattagtggt aaagagtgaa tgatagtagt gaatataaat ggggctgagg aaactttaag 8761 cataaaagat tcctgagatg actttacaag tctgtacgaa tctgccttga ctgtatattt 8821 catactgccc aacaaaacaa taaaaaacaa ttttaaatgc atatttttaa atgtacacag 8881 ttttctattt catcagactt aagtaaaaag cttccacatg aagacccttt ataatatgtg 8941 tgtggttatg caaagagcaa aactcaggta aacactaaag tgagaatgaa aaacaaacct 9001 aaagtaagtt tcaagaagat agaaacttaa atggaaggag ctgacttctg aaaactaagt 9061 catcaattac aacacagttt tacctaagga aaaaatacag caatattcgt taaaagcaca 9121 cagtttttat ggtatataca aggagcaaaa cagaactttt tggtggagta taactcatat 9181 gttcacaagc aaaaccttca attgtaaaat agcacacacc acccagtgaa cagacataga 9241 aaaagtgtta aagtcaacat gaccattact caa //